Index of /pub/pkgsrc/current/pkgsrc/biology/kallisto

[ICO]NameLast modifiedSizeDescription

[PARENTDIR]Parent Directory  -  
[   ]DESCR2018-12-22 04:00 307  
[   ]Makefile2019-05-02 10:00 1.0K 
[   ]PLIST2018-12-22 04:00 337  
[TXT]README.html2020-02-28 22:19 10K 
[   ]distinfo2018-12-22 04:00 560  
[DIR]files/2018-12-22 10:00 -  
[DIR]patches/2018-12-22 10:00 -  

The NetBSD Packages Collection: biology/kallisto Daemon Power

The NetBSD Packages Collection: biology/kallisto

Brief description of the package:
Quantify abundances of transcripts from RNA-Seq data

Please read the file "DESCR" for a longer description, or browse the package's history.

This package has a home page at https://pachterlab.github.io/kallisto/.

Please note that this package has a 2-clause-bsd license.

The package is located in the "biology/kallisto" directory. The current source version of the package is "kallisto-0.45.0nb1". For a summary on how to use the package collection, go to the top of the packages tree.

Problem reports, updates or suggestions for this package should be reported with send-pr.

The following security vulnerabilities are known for biology/kallisto :

If you have a vulnerable package installed on any machine, you are advised to remove the package immediately, using the standard package tools. The pkg_admin audit command locates any installed package which has been mentioned in security advisories as being vulnerable.

This package requires the following package(s) to build: htslib>=1.8 curl>=7.12.3 heimdal>=0.4e cwrappers>=20150314 heimdal>=0.6 libidn2>=2.0.0 libunistring>=0.9.3 libunistring>=0.9.4 nghttp2>=1.0.0 python37>=3.7 libffi>=1.20 libuuid>=2.18 openssl>=1.1.1 libffi>=3.0.11 openssl>=1.1.1dnb2 readline>=2.2 readline>=6.0 python37>=3.7.0 libxml2>=2.6.2 xmlcatmgr>=2.0beta1 libxml2>=2.8.0nb2 heimdal>=1.5.3nb22 nghttp2>=1.40.0nb2 curl>=7.68.0nb2 hdf5>=1.8.7 libaec>=1.0.4 hdf5>=1.8.11 .

This package requires the following package(s) to run: htslib>=1.8 curl>=7.12.3 heimdal>=0.4e heimdal>=0.6 libidn2>=2.0.0 libunistring>=0.9.3 libunistring>=0.9.4 nghttp2>=1.0.0 python37>=3.7 libffi>=1.20 libuuid>=2.18 openssl>=1.1.1 libffi>=3.0.11 openssl>=1.1.1dnb2 python37>=3.7.0 libxml2>=2.6.2 xmlcatmgr>=2.0beta1 libxml2>=2.8.0nb2 heimdal>=1.5.3nb22 nghttp2>=1.40.0nb2 curl>=7.68.0nb2 hdf5>=1.8.7 libaec>=1.0.4 hdf5>=1.8.11 .

This package supports the following build-time options:

(none)

Select one of the links below to download the package in precompiled binary form for installation with pkg_add(1). Available machine architectures and package versions:

alpha:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
alpha:kallisto-0.45.0nb1.tgz(NetBSD 9.0)
earm:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
earm:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
earmv4:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
earmv6hf:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
earmv6hf:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
earmv7hf:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
earmv7hf:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
i386:kallisto-0.45.0nb1.tgz(NetBSD 7.0)
i386:kallisto-0.45.0nb1.tgz(NetBSD 7.0)
i386:kallisto-0.45.0nb1.tgz(NetBSD 7.0)
i386:kallisto-0.45.0nb1.tgz(NetBSD 7.1)
i386:kallisto-0.45.0nb1.tgz(NetBSD 7.1)
i386:kallisto-0.45.0nb1.tgz(NetBSD 7.1)
i386:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
i386:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
i386:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
mips64eb:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
powerpc:kallisto-0.45.0.tgz(NetBSD 7.1)
powerpc:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
powerpc:kallisto-0.45.0nb1.tgz(NetBSD 9.0)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 7.0)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 7.0)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 7.0)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 7.1)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 7.1)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 7.1)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 8.0)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 9.0)
x86_64:kallisto-0.45.0nb1.tgz(NetBSD 9.0)

The NetBSD packages collection is designed to permit easy installation from source - particularly useful if the latest binary package is not available for your chosen platform.


[ Go up one level | Go to top of packages tree | List all packages ]